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Protein-protein interaction networks are spatially and temporally merged from the results of various experimental and predicting methods. These often ignore localization data, which in turn deteriorates the data quality and its predictive potential. We present ComPPI, the compartmentalized protein-protein interaction database. Which provides qualitative information on the interactions, proteins and their localizations.
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Network communities help the functional organization and evolution of complex networks. However, the development of a method, which is both fast and accurate, provides modular overlaps and partitions of a heterogeneous network, has proven to be rather difficult. Here we introduce the novel concept of ModuLand and its plug-in to the widely used Cytoscape progam. In standard GML network fo.
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